Bioinformatics, Identifying an unknown strand of DNA....

Question One: Which type of BLAST search did you choose, and why? The BLAST search that was chosen for this particular sequence was the nucleotide blast, as DNA and RNA are chains of nucleotides. A, C, G and T are the nucleotides that are found in DNA. A, C, G and U are nucleotides that are found in RNA. Nucleotides are the building blocks of proteins. Proteins are chains of amino acids of which there are 20 or so, which are made up of nucleotides. This particular sequence was made up of the nucleotides; Thymine, Adenine, Guanine and Cytosine, therefore, it is a nucleotide sequence, rather than a protein sequence. Question Two: What is the name of the gene? The particular gene is called AF120116. Question Three: 3A- What organism†¦show more content†¦Question Nine: How many amino acids are there in the entire protein that the unknown sequence codes part of? 401 Question Ten: State why the number of nucleotides that encode the protein is not exactly 3 times the number of amino acids that are translated. The number of nucleotides that encode the protein is not exactly 3 times the number of amino acids that are translated because the numbers in the groups of amino acids is uneven to the amount of nucleotides, meaning that the STOP codon, is translated before the end of the nucleotide sequence. Question Eleven: The protein in which the gene AF120116 encodes is named FtsZ, and is found in prokaryotes. It is structurally related to tubulin, and accumulates at the furrow between dividing cells, playing a crucial role in cell division [1]. The cellular concentration of FtsZ regulates the frequency of division and genetic studies have indicated that it is the target of several endogenous division inhibitors [2]. Only certain protists appear to have retained FtsZ, and the protein is absent from the mitochondria of fungi, animals, and higher plants. [3] Without Ftsz, it appears as though Cytokinesis wouldn’t be possible within most bacteria. References [1] Beech PL, Nheu T, Schultz T, Herbert S, Lithgow T, Gilson PR, McFadden GI. Mitochondrial FtsZ in a chromophyte alga. Science (New York, N.Y.), 2000 Feb 18, Vol. 287, Issue 5456, 0036-8075. [2] Crossley R, De Boer P, , Rothfield L. The EssentialShow MoreRelatedCell Biology Final Essay30093 Words   |  121 Pages_______ in eukaryotic cells. A) ribosomes B) oxidative phosphorylation C) DNA molecules -D) a nucleus 2. Cytoplasmic organelles are - A) absent in prokaryotic cells; present in eukaryotic cells. B) present in both prokaryotic and eukaryotic cells. C) present in prokaryotic cells; absent in eukaryotic cells. D) absent in both prokaryotic and eukaryotic cells. 3. Eukaryotic chromosomes contain _______ DNA molecules. A) single linear B) single circular -C) multiple linear Read More4g Communication22481 Words   |  90 Pagesprocessing †¢ Solving problems †¢ Robotics Practical Impact of AI AI components are embedded in numerous devices e.g. in copy machines for automatic correction of operation for copy quality improvement. AI systems are in everyday use for identifying credit card fraud, for advising doctors, for recognizing speech and in helping complex planning tasks. Then there are intelligent tutoring systems that provide students with personalized attention. Thus AI has increased understanding of the natureRead MoreProject Mgmt296381 Words   |  1186 Pagestypes 9.4.2.3 Conflict management 12.2.7 The art of negotiating 12.2.3.5 Change requests Chapter 13 Monitoring Progress Chapter 5 Estimating Times and Costs 6.4 Activity duration estimates (.3) 6.4.2 Estimating tools (.1.3.4) 6.3.1 Identifying resources 7.1 Activity cost estimates (.2.3.4.5) 5.1.2.4 Delphi method Chapter 6 10.5.3 Cost/schedule system (.1) 6.6 .2.1 Time performance 7.2.3.1 Cost baseline development 7.3.2.1 Earned value system (F.4) 7.3.2.4 E.V., performance status